aomlomics-jh

Author of Dockerfile: Luke Thompson with decoration to allow JuptyerHub use by Eli Holmes (NOAA)

License

• Dockerfile: Apache 2.0
• Tourmaline: BSD-3
• QIIME2: BSD-3

Description

This uses the NOAA AOML Tourmaline Docker image as a base and adds tooling so that it can be launched in a JupyterHub. Per the AOML repo: “Tourmaline is an amplicon sequence processing workflow for Illumina sequence data that uses QIIME 2 and the software packages it wraps. Tourmaline manages commands, inputs, and outputs using the Snakemake workflow management system.” See the base repo for information.